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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941756.1_cds_XP_016485519.1_76434
CDS Infomation

[gene=LOC107805926] [db_xref=GeneID:107805926] [protein=lysM domain-containing GPI-anchored protein 1-like] [protein_id=XP_016485519.1] [location=join(4297..4960,5944..6061,6139..6300,6410..6441,6854..7131)] [gbkey=CDS]
Sequence

ATGCTACATTTCTTCTTCACCATATTCCTACTGTTGAGCAACAGCTGCTTCATCTATCAA
ACAACCTCAAAATCCACCATTGAGCCATGTTCCAACTCAGATACTTGCTCTTCACTTGTT
GGCTACACACTTTACACTGACCTCAAAGTTTCTGAGGTGGCCTCACTCTTTCAAACTGAC
CCAATCTCTCTTCTCACTACCAATGCTATTGATATCTCATATCCTGATGTTGAAAACCAC
ATACTTCCAGCTAAATTGTTCCTTAAAGTTCCTGTTACATGTTCTTGTGTTGATGGGATC
TTTAAGTCTGCTTTTGTACATTACAAGACTAGGCCTTCAGATACTTTGTCTTTGATTGCT
GACACTGTATATGGCGCTCTTGTTTCTGCTGACCAGATTAAGGAAGGGAATCCTACTGCT
GTTGGTTCTGATCCTTCAGTGCTTAATGTTGGGACTAACCTTTGGATTCCACTTCCTTGC
ACTTGCTTTAATGGGACTGACAATAATCTACCTGCTATTTATATGTCATATGTTGTTAGA
CCTGTGGATACTCTTGCAGGGATTGCTGCTAGCTATTCCACTACTCTTACTGATCTTATG
AATGTCAATGCTTTGGGCAGTCCTGCTATTAAGGAGGGTGACATTCTTGCTATTCCCTTA
TCTGCTTGTGCATCTAGCTTCCCAAGATTTGCCTCAGATTATGCCTTATCTGTTGCGAAC
GGGAGCTATGCTATTACAGCTAGCCACTGTGTGCAATGCAGTTGCGGACCAGGAAGTCGG
AATTTGTACTGCATGCCAGCTTCCTTAGCAGTTTCTTGCTCAAGCATGCAGTGCAAGAAC
AGCAATCTCATGCTCGGAAATGTTACTGTACAACAGACTGGCGGTGGTTGCAATGTGACT
TCTTGTAATTATGGTGGCTTTGTCAATGGAACCATCATCACTACATTATCCTCATCTCTT
CAACCTCGATGCCCAGGACTGCAACAACTTCCTCCACTTGTTGTCCCACCTACTTCGGTA
GGCCCAGACTCAATGTTTGCTCCTGCTCCTTCACCTTCTGAATCTGGCGGTGCTCCAATG
GATGGTCCACATTCTTCGGTGGTGCCTGCATCTGGCTCTGTTATCGCATTTCCACCTTCA
GGTGGACCAAGTGGAAGTGCATCTTCTGCTTGGTCGTTGAACCCTTTAGCTAGTTTTCCA
ATTGCAATTCTCTTGTATCTATGTGTGAAATATGTGATCTCACTTCCGTTATGA

Peptide Sequence

PEP ID

XP_016485519.1
PEP Infomation

PREDICTED: lysM domain-containing GPI-anchored protein 1-like [Nicotiana tabacum]
Sequence

MLHFFFTIFLLLSNSCFIYQTTSKSTIEPCSNSDTCSSLVGYTLYTDLKVSEVASLFQTD
PISLLTTNAIDISYPDVENHILPAKLFLKVPVTCSCVDGIFKSAFVHYKTRPSDTLSLIA
DTVYGALVSADQIKEGNPTAVGSDPSVLNVGTNLWIPLPCTCFNGTDNNLPAIYMSYVVR
PVDTLAGIAASYSTTLTDLMNVNALGSPAIKEGDILAIPLSACASSFPRFASDYALSVAN
GSYAITASHCVQCSCGPGSRNLYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVT
SCNYGGFVNGTIITTLSSSLQPRCPGLQQLPPLVVPPTSVGPDSMFAPAPSPSESGGAPM
DGPHSSVVPASGSVIAFPPSGGPSGSASSAWSLNPLASFPIAILLYLCVKYVISLPL

Transcript Sequence

Gene sequence data has not been registered.